CDS

Accession Number TCMCG006C123283
gbkey CDS
Protein Id NP_001302788.1
Location complement(join(9091489..9091659,9091752..9091862,9091949..9092128,9092233..9092337,9092462..9092560,9092648..9092803,9093102..9093180,9093249..9093314,9093410..9093567,9093649..9094002,9094118..9094273,9094414..9094491,9094626..9094946))
Gene LOC106451277
GeneID 106451277
Organism Brassica napus

Protein

Length 677aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink --
db_source NM_001315859.1
Definition E3 ubiquitin-protein ligase COP1-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category T
Description Zinc finger, C3HC4 type (RING finger)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10143        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04115        [VIEW IN KEGG]
ko04120        [VIEW IN KEGG]
ko04712        [VIEW IN KEGG]
map04115        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000151        [VIEW IN EMBL-EBI]
GO:0000152        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009641        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009646        [VIEW IN EMBL-EBI]
GO:0009647        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009649        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009812        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010119        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046283        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080008        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAGATTAGGAAGGATCCGCTAGTTCCGGCTGTGAAACCCGATCCGAGAACCTCCTCCATCGGAGAAGGCCACAACCACCGCCACGAAAACGACGAAGGAGGAAGCGGTGGTTTAGAGATTGGAGCTCCGGATCTGGATAAGGACTTGCTCTGTCCGATTTGTATGCAGGTTATAAAAGATGCTTTCCTCACGGCGTGTGGACACAGCTTCTGTTACATGTGCATCATCACGCACCTTAGGAACAAGAGCGATTGTCCCTGTTGTAGCCAGCACCTCACAAATAATCAGCTTTACCCTAACTTCTTACTCGATAAGCTGTTGAAGAAAACTTCAGCTCGGCATGTGTCGAAAACTGCATCGCCTTTGGATCAGTTTCGGGACGCATTACAACGGGGTTTTGATGTGTCAATTAAAGAGGTTGATAATCTGCTGACACTTCTTGCGGAAAAGAAGAGGAAAATGGAACAGGAAGAAGCTGAGAGGAACATGCAGATACTCTTGGACTTTTTGCATTGTCTGAGGAAGCAGAAAGTTGATGAACTTAATGAGGTGCAAACTGATCTTCAGTATATTAAAGAAGACATAAATGCAGTTGAGAGACATAGAATAGATTTGTACCGTGCTCGGGATAGGTACTCTGTGAAGTTACGAATGCTCGGAGATGATCCAAGCACACGAAATGCTTGGCCGCCTGAGAAGAGTCACACCGGCTTCAACTCCAATTCTCTGAGCATAAGAGGAGGGAATCCATCAGGCAATTTTCAAAACAAAAAGGTAGTAGAGGGGAAGGCACAAGGAAGCTCTCACGGGATATCGAAAAAGGATGCACAGAGTGGATCAGATTCCCAAAGTTTGAATCAGTCATCTGTCTCAATGGCCAGGAAGAAACGGATCCATGCTCAGTTCAACGATCTACAAGAGTGTTACCTCCAAAAGCGGCGTCAGTTGGTAGACCAACCACATACTAATCAAGAAAGTGATAATAGTGTAGTACGTAGGGAAGGATACAGCCACGGCCTTGCAGATTTTCAATCTGTGCTCACTACCTTTACTCGCTACAGTCGTCTGAGAGTTATAGCGGAGATCCGGCATGGGGATATATTTCATTCAGCTAACATTGTATCAAGCATAGAGTTTGATCGTGATGATGAGCTCTTCGCCACTGCTGGTGTTTCTAGATGTATAAAGGTTTTTGACTTCTCTTCGGTTGTAAATGAACCGGCAGATATACAGTGTCCGATTGTGGAGATGTCAACTCGCTCCAAACTTAGTTGTTTGAGTTGGAATAAGCACGAGAAAAATCATATAGCGAGTAGTGATTATGAAGGAATAGTAACTGTATGGGATGTAACTACTAGACAGAGTCTTATGGAGTATGAAGAGCACGAAAAACGTGCCTGGAGTGTTGACTTTTCGCGAACAGAACCATCTATGCTTGTATCTGGTAGTGACGATTGTAAGGTTAAAGTTTGGTGCACAAGGCAGGAAGCAAGTGTGCTTAACATTGATATGAAAGCAAACATTTGTTGTGTCAAGTACAATCCTGGCTCAAGCAACTTCATTGCGGTCGGATCAGCTGATCATCACATCCATTACTACGATTTAAGAAACATAAGCCAACCACTTCATGTCTTCAGTGGACACAAGAAAGCGGTCTCCTATGTGAAGTTTTTGTCCAACAACGAGCTCGCGTCTGCGTCTACTGATAGCACACTACGCTTATGGGATGTCAAGGACAACTTGCCAGTTCGGACATTTAGAGGACACACTAACGAGAAGAACTTTGTGGGTCTCACAGTGAACAGCGAGTATCTCGCCTGCGGAAGCGAGACAAATGAAGTATATGTATATCACAAGGAGATCACGAAACCTGTGACATCGCATAGGTTTGGATCACTAGACATGGAGGAAGCAGAGGAAGAGGCGGGTTCATACTTTATTAGTGCGGTTTGCTGGAAGAGCGATAGTCCCACGATGCTGACTGCGAATAGCCAAGGAACCATCAAAGTTCTGGTACTCGCTGCTTGA
Protein:  
MEEIRKDPLVPAVKPDPRTSSIGEGHNHRHENDEGGSGGLEIGAPDLDKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPPEKSHTGFNSNSLSIRGGNPSGNFQNKKVVEGKAQGSSHGISKKDAQSGSDSQSLNQSSVSMARKKRIHAQFNDLQECYLQKRRQLVDQPHANQESDNSVVRREGYSHGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADIQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNFIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELESASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITKPVTSHRFGALDMEEAEEEAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA